BLAST Search Results

    BLASTX 2.0.10 [Aug-26-1999]

    Reference:
    Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
    Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
    "Gapped BLAST and PSI-BLAST: a new generation of protein database search
    programs",  Nucleic Acids Res. 25:3389-3402.

    Query= gi|1347369|gb|G25137.1|G25137 human STS EST48004.
             (556 letters)

    Database: Non-redundant SwissProt sequences
               82,258 sequences; 29,652,561 total letters

     If you have any problems or questions with the results of this search
    please refer to the BLAST FAQs

### Distribution of 5 Blast Hits on the Query Sequence

                                                                       Score     E
    Sequences producing significant alignments:                        (bits)  Value

    sp|P54103|ZRF1_MOUSE  ZUOTIN RELATED FACTOR-1                      87  3e-17
    sp|P34454|YMA9_CAEEL  HYPOTHETICAL 31.6 KD PROTEIN F54F2.9 I...    42  0.001
    sp|Q61712|MTJ1_MOUSE  DNAJ PROTEIN HOMOLOG MTJ1                    37  0.033
    sp|P53745|YN8X_YEAST  HYPOTHETICAL 68.1 KD PROTEIN IN BIO3-F...    29  7.4

     sp|P54103|ZRF1_MOUSE ZUOTIN RELATED FACTOR-1
               Length = 514

     Score = 86.6 bits (211), Expect = 3e-17
     Identities = 41/47 (87%), Positives = 44/47 (93%)
     Frame = +1

    Query: 1   DLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAK 141
               DLQLLIKAVNLFPAG NSRW+VIANYMNIHSSSGVKRTAKDVI + +
    Sbjct: 458 DLQLLIKAVNLFPAGRNSRWDVIANYMNIHSSSGVKRTAKDVISEVR 504

     sp|P34454|YMA9_CAEEL HYPOTHETICAL 31.6 KD PROTEIN F54F2.9 IN CHROMOSOME III
               Length = 275

     Score = 41.8 bits (96), Expect = 0.001
     Identities = 30/122 (24%), Positives = 54/122 (43%)
     Frame = +1

    Query: 34  FPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKE 213
               +PAGT +RWE +   +N        R+A+DVI  A  ++++   +++D  K      ++
    Sbjct: 159 YPAGTPNRWEQMGRVLN--------RSAEDVIAMAGKMKQM---KQEDYTKLLMTTIQQS 207

    Query: 214 HGVVPQADNATPSERFXGPYTDFTPXTTEXQKLXEQALNTYPVNTXERWXXIAVAVPGRX 393
                 V  ++++                 +   QK  E AL  YP  T ERW  I+  +  +
    Sbjct: 208 VPVEEKSED---------------DWSQAEQKAFETALQKYPKGTDERWERISEEIGSKT 252

    Query: 394 KE 399
               K+
    Sbjct: 253 KK 254

     sp|Q61712|MTJ1_MOUSE DNAJ PROTEIN HOMOLOG MTJ1
               Length = 552

     Score = 36.7 bits (83), Expect = 0.033
     Identities = 17/36 (47%), Positives = 19/36 (52%)
     Frame = +1

    Query: 292 TTEXQKLXEQALNTYPVNTXERWXXIAVAVPGRXKE 399
               T   QKL E AL  YP    +RW  IA  VP + KE
    Sbjct: 496 TQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKE 531

     Score = 31.3 bits (69), Expect = 1.5
     Identities = 18/50 (36%), Positives = 26/50 (52%)
     Frame = +1

    Query: 1   DLQLLIKAVNLFPAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQ 150
               DL  L +++  FP GT  RW+ IA+ +         R+  DV  KAK L+
    Sbjct: 332 DLSQLTRSMVKFPGGTPGRWDKIAHELG--------RSVTDVTTKAKELK 373

     sp|P53745|YN8X_YEAST HYPOTHETICAL 68.1 KD PROTEIN IN BIO3-FRE4 INTERGENIC REGION
               Length = 580

     Score = 29.0 bits (63), Expect = 7.4
     Identities = 27/99 (27%), Positives = 41/99 (41%)
     Frame = +1

    Query: 52  SRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKEHGVVPQ 231
               +RW+   +Y        V R+ KDV   ++SL  LD +QK     +A       H +
    Sbjct: 75  NRWKSFISY--------VTRSRKDVKTVSRSLSNLDLYQKCSKEIRADQDISLLHSI--- 123

    Query: 232 ADNATPSERFXGPYTDFTPXTTEXQKLXEQALNTYPVNT 348
                      E    PY +FT   +      EQ+ N +PV+T
    Sbjct: 124 -------ETKLFPYINFTALNS------EQSHNFWPVHT 149

      Database: Non-redundant SwissProt sequences
        Posted date:  Dec 28, 1999  4:33 PM
      Number of letters in database: 29,652,561
      Number of sequences in database:  82,258

    Lambda     K      H
       0.318    0.135    0.401

    Gapped
    Lambda     K      H
       0.270   0.0470    0.230

    Matrix: BLOSUM62
    Gap Penalties: Existence: 11, Extension: 1
    Number of Hits to DB: 23174157
    Number of Sequences: 82258
    Number of extensions: 387821
    Number of successful extensions: 980
    Number of sequences better than 10.0: 8
    Number of HSP's better than 10.0 without gapping: 3
    Number of HSP's successfully gapped in prelim test: 1
    Number of HSP's that attempted gapping in prelim test: 973
    Number of HSP's gapped (non-prelim): 7
    length of query: 185
    length of database: 29,652,561
    effective HSP length: 49
    effective length of query: 135
    effective length of database: 25,621,919
    effective search space: 3458959065
    effective search space used: 3458959065
    frameshift window, decay const: 50,  0.1
    T: 12
    A: 40
    X1: 16 ( 7.3 bits)
    X2: 38 (14.8 bits)
    X3: 64 (24.9 bits)
    S1: 41 (21.7 bits)
    S2: 62 (28.6 bits)