EMBOSS

| NUCLEIC COMPOSITION

Composition of nucleotide sequences

Program name | Description
--- | ---
banana | Bending and curvature plot in B-DNA
btwisted | Calculates the twisting in a B-DNA sequence
chaos | Create a chaos game representation plot for a sequence
compseq | Count composition of dimer/trimer/etc words in a sequence
dan | Calculates DNA RNA/DNA melting temperature
freak | Residue/base frequency table or plot
isochore | Plots isochores in large DNA sequences
sirna | Finds siRNA duplexes in mRNA
wordcount | Counts words of a specified size in a DNA sequence