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RDKit
Open-source cheminformatics and machine learning.
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#include <TorsionAngleContribs.h>
Public Member Functions | |
| TorsionAngleContribs ()=default | |
| TorsionAngleContribs (ForceField *owner) | |
| Constructor. | |
| ~TorsionAngleContribs () override=default | |
| void | addContrib (unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, std::vector< double > forceConstants, std::vector< int > signs) |
| Add contribution to this collection. | |
| double | getEnergy (double *pos) const override |
| return the contribution of this contrib to the energy of a given state | |
| void | getGrad (double *pos, double *grad) const override |
| TorsionAngleContribs * | copy () const override |
| Copy constructor. | |
| bool | empty () const |
| Return true if there are no contributions in this contrib. | |
| unsigned int | size () const |
| Get number of contributions in this contrib. | |
| Public Member Functions inherited from ForceFields::ForceFieldContrib | |
| ForceFieldContrib () | |
| ForceFieldContrib (ForceFields::ForceField *owner) | |
| virtual | ~ForceFieldContrib () |
Additional Inherited Members | |
| Protected Attributes inherited from ForceFields::ForceFieldContrib | |
| ForceField * | dp_forceField {nullptr} |
| our owning ForceField | |
Definition at line 50 of file TorsionAngleContribs.h.
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default |
Referenced by copy().
| ForceFields::CrystalFF::TorsionAngleContribs::TorsionAngleContribs | ( | ForceField * | owner | ) |
Constructor.
| owner | pointer to the owning ForceField |
References ForceFields::ForceFieldContrib::ForceField.
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overridedefault |
| void ForceFields::CrystalFF::TorsionAngleContribs::addContrib | ( | unsigned int | idx1, |
| unsigned int | idx2, | ||
| unsigned int | idx3, | ||
| unsigned int | idx4, | ||
| std::vector< double > | forceConstants, | ||
| std::vector< int > | signs ) |
Add contribution to this collection.
| idx1 | index of atom1 in the ForceField's positions |
| idx2 | index of atom2 in the ForceField's positions |
| idx3 | index of atom3 in the ForceField's positions |
| idx4 | index of atom4 in the ForceField's positions |
| forceConstants | force constants for the torsion potentials |
| signs | phase for the torsion potentials (-1 or 1) |
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inlineoverridevirtual |
Copy constructor.
Implements ForceFields::ForceFieldContrib.
Definition at line 87 of file TorsionAngleContribs.h.
References TorsionAngleContribs().
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inline |
Return true if there are no contributions in this contrib.
Definition at line 92 of file TorsionAngleContribs.h.
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overridevirtual |
return the contribution of this contrib to the energy of a given state
| pos | positions of the atoms in the current state |
Implements ForceFields::ForceFieldContrib.
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overridevirtual |
calculate the contribution of this contrib to the gradient at a given state
| pos | positions of the atoms in the current state |
| grad | gradients to be adapted |
Implements ForceFields::ForceFieldContrib.
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inline |
Get number of contributions in this contrib.
Definition at line 95 of file TorsionAngleContribs.h.